Error handling for each ISV application

General

-The following error occurs immediately after the program runs:

unable to connect to forwarded X server: Network error: Connection refused
Error: Can't open display: localhost:13.0.
Application name: Xt error: Can't open display: 
Application name: DISPLAY is not set

The X server configration may be wrong. See the section 1 and 2 of the FAQ "X application doesn't work."
 

-The GUI program suddenly terminates
Please check the keep alive setting in the terminal you use. See the FAQ "Session suddenly disconnected while working on TSUBAME3."

-A job abruptly aborted 
Although various reasons can be considered, please check the gollowing.
 -Check of batch error file (usually script_name.e.$JOBID )
 -Check program-specific log file
 -Check the free space of the directory

reference: FAQ

About common errors in Linux
"Disk quta exceeded" error is output
The range of support by T3 Helpdesk about the program error such as segmentation fault
 


Maple

-The following error occurs immediately after the program runs:

Exception in thread "Request id 1" java.lang.UnsupportedOperationException:PERPIXEL_TRANSLUCENT translucency is not supported

It is due to the compatibility between the application and the X server. See the section 3 of the FAQ "X application doesn't work."
It has been confirmed that the error occurs with Xming but not occurs with mobaXterm.


ANSYS

-The GUI program freezes

It is due to the compatibility between the application and the X server. See the section 3 of the FAQ "X application doesn't work."
The trouble occurs with the X server that does not support GL, and it does not occur with the other supporting GL such as ASTEC-X.
In Ansys R18.2, the operation of GL version Xming (Xming-mesa) has been confirmed.

 Fluent

-The following error occurs immediately after the program runs:
Reduce the number of used nodes / processes to be less than the license limit.

In the example below, we are using an HPC license of 94 tokens(f_node=3)
In case of 2 f_nodes, error will not occur because it is within limit. 

 Unable to spawn node: license not available.
 ANSYS LICENSE MANAGER ERROR:The request for 94 tasks of feature aa_r_hpc cannot be granted.  Only 16 tasks are available.
 Request name aa_r_hpc does not exist in the licensing pool.
 Checkout request denied as it exceeds the MAX limit specified in the options file.
 Feature:       aa_r_hpc
 License path:  27001@lice0:27001@remote:27001@t3ldap1:
 FlexNet Licensing error:-194,147
 For further information, refer to the FlexNet Licensing documentation,
 available at "www.flexerasoftware.com".

 Hit return to exit.
 The fluent process could not be started.


ex:Notification to apply the license restriction for ANSYS (Jan. 31)


ABAQUS

-The following error occurs immediately after the program runs:

Error in job ***: Error checking out Abaqus license.

It is the normal handling at the login node. The use of the solver license is prohibited at the login node.
ex:Notice of the restriction of using ABAQUS analysis on login node and temporary unavailable of it due to maintenance of the license server

Please run the job via the batch job scheduler.
See TSUBAME3.0 User's Guide for the batch job scheduling system.

-The following message is displayed while the program runs:

Analysis initiated from SIMULIA established products
Abaqus JOB intel_int
Abaqus 3DEXPERIENCE R2017x
Successfully checked out QEX/103 from DSLS server remote
Queued for QXT/103
"QXT" license request queued for the License Server on remote.
Total time in queue: 60 seconds.
Position in the queue: 1
Total time in queue: 30 seconds.
Position in the queue: 2
Total time in queue: 91 seconds.

It is in waiting because of the license shortage.
Calculation starts as soon as sufficient licenses are secured.
Note that The TSUBAME points are consumed even in waiting.

-Abaqus / Explicit generates the following error at parallel execution

Abaqus Error: Abaqus/Explicit Packager exited with an error - Please see the 
status file for possible error messages if the file exists.
Begin MFS->SFS and SIM cleanup
Fri 17 Aug 2018 10:40:23 AM JST
Run SMASimUtility
Fri 17 Aug 2018 10:40:24 AM JST
End MFS->SFS and SIM cleanup
Abaqus/Analysis exited with errors

As a workaround, please read the countermeasure module as follows
abaqus/2017 Execute the module purge command before executing if it is reading.

$ module load abaqus/2017_explicit

COMSOL Multiphysics 

-The following message is displayed while the program runs
It occurs with the X server that does not supoort GL. Please use the X server supporting GL or execute with software rendering mode.

$ comsol
function is no-op
#
# A fatal error has been detected by the Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x00007fff0f0252bf, pid=10485,
tid=0x00007fff0e7f9700
#
# JRE version: Java(TM) SE Runtime Environment (8.0_112-b15)
(build1.8.0_112-b15)
# Java VM: Java HotSpot(TM) 64-Bit Server VM (25.112-b15 mixed
modelinux-amd64 compressed oops)
# Problematic frame:
# C  [libcs3d_ogl.so+0x2a2bf]
#
# Failed to write core dump. Core dumps have been disabled. To enable
coredumping, try "ulimit -c unlimited" before starting Java again
#
# An error report file with more information is saved as:
# /home/XX/XXXXXX/hs_err_pidXXXXXX.log
#
# If you would like to submit a bug report, please visit:
#   http://bugreport.java.com/bugreport/crash.jsp
#
/apps/t3/sles12sp2/isv/comsol/comsol53/multiphysics/bin/comsol: line
1615:10485 Aborted                 (core dumped)
${MPICMD}${FLROOT}/bin/${ARCH}/comsollauncher --launcher.ini
${LAUNCHERINIFILE}${LAUNCHERARGS} ${MPILAUNCHERARGS} 


-The following message is displayed while the program runs

License error. Wait until the license is available and try again.
Please check the manual for checking the license.

 /******************/
 /*****Error********/
 /******************/
 Could not obtain license for COMSOL Multiphysics. License error: -4.
 Licensed number of users already reached.
 Feature: COMSOL License path:
 /apps/t3/sles12sp2/isv/comsol/comsol53/multiphysics/license/license.dat:
 FlexNet Licensing error:-4,132 For further information,
 refer to the FlexNet Licensing documentation,
 available at "www.flexerasoftware.com".
 Total time: 4 s.


Materials Studio

-The following message is displayed while the program runs
Please be sure to check the output file as multiple causes can be considered only with the error below.

The job has failed.
Download any results generated so far?

(Results files will be permanently removed from Server)

ex: License error.
In the case of the example below it is a license error. Wait until the license is available and try again.

Laboratory etc. TSUBAME is executed by anything other than TSUBAME but it always occurs after the summer maintenance in 2018.
Reference:License restriction on ISV application usage

As a countermeasure, please use the batch job scheduler.
Please check the job scheduling system of TSUBAME3.0 User's Guide.

Output file (example of CASTEP)

 Job started on host GSIC
 at Thu Aug 16 13:20:06 2018

 +-------------------------------------------------+
 |                                                 |
 |      CCC   AA    SSS  TTTTT  EEEEE  PPPP        |
 |     C     A  A  S       T    E      P   P       |
 |     C     AAAA   SS     T    EEE    PPPP        |
 |     C     A  A     S    T    E      P           |
 |      CCC  A  A  SSS     T    EEEEE  P           |
 |                                                 |
 +-------------------------------------------------+

 This version was compiled for x86_64-windows-msvc2013 on Dec 07 2016
 Code version: 7217
 Intel(R) Math Kernel Library Version 11.3.1 
 Fundamental constants values: CODATA 2010
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Licensing Error !
Error: Manual heartbeat setup for MS_castep license failed
Failed to check out licenses
Trace stack not available

Output file (example of Dmol3)

     ===============================================================
     Materials Studio DMol^3 version 2017 R2         
     compiled on Dec  7 2016 22:56:21
     ===============================================================
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
DATE:     Aug 16 13:20:06 2018
 
Job started on host GSIC

This run uses    1 processors
Licensing Error !
Error: Failed to checkout MS_dmol license
Message: DMol3 job failed
Error: DMol3 exiting
Message: License checkin of MS_dmol successful

ARM

ex: License error.

In the case of the example below it is a license error. Wait until the license is available and try again.


MAP: Your licence does not currently have enough processes available.
MAP: Requested Processes: 4
MAP: Available Processes: 3
Arm Forge 19.0.5 - Arm MAP

MAP: Your licence does not currently have enough processes available.
MAP: Requested Processes: 4
MAP: Available Processes: 2
MAP: Unable to obtain a valid licence.
Unable to obtain a valid licence.
Waiting for seat